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Stuart Chalk

I am an Associate Professor Chemistry trained as an analytical chemist with expertise in flow analysis methodology and instrumentation. Over the last 15 years I have morphed into a cheminformatician working on research projects to develop data standards (e.g. the Analytical Information Markup Language - AnIML, Common Standard for eXchange – CSX, Experiment Markup Language - ExptML), electronic laboratory notebooks (E.g. the Eureka Research Workbench), scientific ontologies (e.g. the Chemical Analysis Ontology – CAO), and scientific data representation. My current projects include: REST API development for NIST-IUPAC solubility datasets, chemical property data extraction and annotation from PDF files, scientific data framework (SciDF) development, and the Chemical Analysis Metadata Platform (ChAMP). I have expertise in XML and Markup Languages, XSLT/XPATH/SVG, RDF, JSON/JSON-LD, PHP, Javascript, MySQL, SPARQL, CSS, CMS’s, REST interfaces, API design and construction, schema design, ontology development and Fedora-Commons.

Interest Group
Stage: IG Established
TAB Liaison: Raphael Cóbe
Introduction: We are proposing a Chemistry Research Data Interest Group under the auspices of the Research Data Alliance (RDA), to foster diverse professional exchange on issues particular to data ori...
Interest Group
Stage: IG Established
Secretariat Liaison: Bridget Walker
TAB Liaison: Mingfang Wu
The context of increasing volumes of data being created by researchers and the strengthening of requirements for research data management and data sharing has created demand for a new and evolving set...
Coordination Group
Chair(s): Shelley Stall
Enabling FAIR Data in the Earth, Space, and Environmental Sciences Open, accessible, and high-quality data and related data products and software are critical to the integrity of published research. ...
Interest Group
Stage: IG Established
TAB Liaison: Rossella Aversa
The Data Fabric IG (DFIG) identified that working with data in the many scientific labs and most probably also in other areas such as industry and governance is highly inefficient and too costly. Exce...
Coordination Group
GEDErda20Charter_rev02-2.docx GEDErda20procedure-v01-1-2.docx GEDE20webinar_EOSC20Process_7.11.2019-2.pdf
Working Group
Stage: WG Producing Deliverables
Secretariat Liaison: Bridget Walker
TAB Liaison: Anupama Gururaj
The focus of the WG is on increasing uptake of the FAIR Principles in materials research (in particular in connection with Interoperability and Reusability), supported by improved resources, in partic...
Working Group
Stage: WG Maintaining Deliverables
TAB Liaison: Rossella Aversa
InteroperAble Descriptions of Observable Property Terminology WG (I-ADOPT WG) Webinar – Decomposing Observable Property Descriptions into Machine-Readable Components – 28 July 2021 The I-A...
Interest Group
Stage: IG Established
The Metadata IG will concern itself with all aspects of metadata for research data.  In particular, it will attempt to coordinate the efforts of the WGs concerned with metadata to produce a coherent ...
Working Group
Stage: WG Wrapping up
Secretariat Liaison: Bridget Walker
TAB Liaison: Anupama Gururaj
Multi-Omics Metadata Standards Integration (MOMSI) WG Background  Multi-omics data integration merges multiple Omics data types (e.g., genomics, proteomics, metabolomics, phenomics, etc.) leveraging ...
Working Group
Stage: WG Maintaining Deliverables
Secretariat Liaison: Bridget Walker
TAB Liaison: Najla Rettberg
The Persistent Identification of Instruments Working Group seeks to explore a community-driven solution for globally unique identification of measuring instruments operated in the sciences. Measuring ...